252 lines
14 KiB
TeX
252 lines
14 KiB
TeX
%======================================================================
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% University of Waterloo Thesis Template for LaTeX
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% Last Updated August 2022
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% by IST Client Services,
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% University of Waterloo, 200 University Ave. W., Waterloo, Ontario, Canada
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% FOR ASSISTANCE, please send mail to helpdesk@uwaterloo.ca
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% DISCLAIMER
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% To the best of our knowledge, this template satisfies the current uWaterloo thesis requirements.
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% However, it is your responsibility to assure that you have met all requirements of the University and your particular department.
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% Many thanks for the feedback from many graduates who assisted the development of this template.
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% Also note that there are explanatory comments and tips throughout this template.
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%======================================================================
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% Some important notes on using this template and making it your own...
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% The University of Waterloo has required electronic thesis submission since October 2006.
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% See the uWaterloo thesis regulations at
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% https://uwaterloo.ca/graduate-studies/thesis.
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% This thesis template is geared towards generating a PDF version optimized for viewing on an electronic display, including hyperlinks within the PDF.
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% DON'T FORGET TO ADD YOUR OWN NAME AND TITLE in the "hyperref" package configuration below.
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% Search for: PDFTITLE, PDFAUTHOR, PDFSUBJECT, and PDFKEYWORDS.
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% THIS INFORMATION GETS EMBEDDED IN THE FINAL PDF DOCUMENT.
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% You can view the information if you view properties of the PDF document.
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% Many faculties/departments also require one or more printed copies.
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% This template attempts to satisfy both types of output.
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% See additional notes below.
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% It is based on the standard "book" document class which provides all necessary sectioning structures and allows multi-part theses.
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% If you are using this template in Overleaf (cloud-based collaboration service), then it is automatically processed and previewed for you as you edit.
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% For people who prefer to install their own LaTeX distributions on their own computers, and process the source files manually, the following notes provide the sequence of tasks:
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% E.g. to process a thesis called "mythesis.tex" based on this template, run:
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% pdflatex mythesis -- first pass of the pdflatex processor
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% bibtex mythesis -- generates bibliography from .bib data file(s)
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% makeindex -- should be run only if an index is used
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% pdflatex mythesis -- fixes numbering in cross-references, bibliographic references, glossaries, index, etc.
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% pdflatex mythesis -- it takes a couple of passes to completely process all cross-references
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% If you use the recommended LaTeX editor, Texmaker, you would open the mythesis.tex file, then click the PDFLaTeX button. Then run BibTeX (under the Tools menu).
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% Then click the PDFLaTeX button two more times.
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% If you have an index as well,you'll need to run MakeIndex from the Tools menu as well, before running pdflatex
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% the last two times.
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% N.B. The "pdftex" program allows graphics in the following formats to be included with the "\includegraphics" command: PNG, PDF, JPEG, TIFF
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% Tip: Generate your figures and photos in the size you want them to appear in your thesis, rather than scaling them with \includegraphics options.
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% Tip: Any drawings you do should be in scalable vector graphic formats: SVG, PNG, WMF, EPS and then converted to PNG or PDF, so they are scalable in the final PDF as well.
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% Tip: Photographs should be cropped and compressed so as not to be too large.
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% To create a PDF output that is optimized for double-sided printing:
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% 1) comment-out the \documentclass statement in the preamble below, and un-comment the second \documentclass line.
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% 2) change the value assigned below to the boolean variable "PrintVersion" from " false" to "true".
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%======================================================================
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% D O C U M E N T P R E A M B L E
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% Specify the document class, default style attributes, and page dimensions, etc.
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% For hyperlinked PDF, suitable for viewing on a computer, use this:
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\documentclass[letterpaper,12pt,titlepage,oneside,final]{book}
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% For PDF, suitable for double-sided printing, change the PrintVersion variable below to "true" and use this \documentclass line instead of the one above:
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%\documentclass[letterpaper,12pt,titlepage,openright,twoside,final]{book}
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% Some LaTeX commands I define for my own nomenclature.
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% If you have to, it's easier to make changes to nomenclature once here than in a million places throughout your thesis!
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\newcommand{\package}[1]{\textbf{#1}} % package names in bold text
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\newcommand{\cmmd}[1]{\textbackslash\texttt{#1}} % command name in tt font
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\newcommand{\href}[1]{#1} % does nothing, but defines the command so the print-optimized version will ignore \href tags (redefined by hyperref pkg).
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%\newcommand{\texorpdfstring}[2]{#1} % does nothing, but defines the command
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% Anything defined here may be redefined by packages added below...
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% This package allows if-then-else control structures.
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\usepackage{ifthen}
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\newboolean{PrintVersion}
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\setboolean{PrintVersion}{false}
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% CHANGE THIS VALUE TO "true" as necessary, to improve printed results for hard copies by overriding some options of the hyperref package, called below.
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%\usepackage{nomencl} % For a nomenclature (optional; available from ctan.org)
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\usepackage{amsmath,amssymb,amstext} % Lots of math symbols and environments
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\usepackage[pdftex]{graphicx} % For including graphics N.B. pdftex graphics driver
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\usepackage{xcolor}
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\usepackage{algorithm}
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\usepackage{algpseudocode}
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\usepackage{setspace}
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\doublespacing
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%\usepackage{algorithmic}
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% Hyperlinks make it very easy to navigate an electronic document.
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% In addition, this is where you should specify the thesis title and author as they appear in the properties of the PDF document.
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% Use the "hyperref" package
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% N.B. HYPERREF MUST BE THE LAST PACKAGE LOADED; ADD ADDITIONAL PKGS ABOVE
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\usepackage[pdftex,pagebackref=false]{hyperref} % with basic options
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%\usepackage[pdftex,pagebackref=true]{hyperref}
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% N.B. pagebackref=true provides links back from the References to the body text. This can cause trouble for printing.
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\newcommand{\mytitle}{Ph.D Research Proposal}
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\newcommand{\myauthor}{Arthur Grisel-Davy}
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\newcommand{\mytopic}{Physics-Based Cyber Security}
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\newcommand{\myinstitution}{University of Waterloo}
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\newtheorem{problem-statement}{Problem Statement}
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\hypersetup{
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plainpages=false, % needed if Roman numbers in frontpages
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unicode=false, % non-Latin characters in Acrobat’s bookmarks
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pdftoolbar=true, % show Acrobat’s toolbar?
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pdfmenubar=true, % show Acrobat’s menu?
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pdffitwindow=false, % window fit to page when opened
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pdfstartview={FitH}, % fits the width of the page to the window
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pdftitle={\mytitle}, % title: CHANGE THIS TEXT!
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pdfauthor={\myauthor}, % author: CHANGE THIS TEXT! and uncomment this line
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pdfsubject={\mytopic}, % subject: CHANGE THIS TEXT! and uncomment this line
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% pdfkeywords={Power Analysis} {Sid} {key3}, % list of keywords, and uncomment this line if desired
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pdfnewwindow=true, % links in new window
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colorlinks=true, % false: boxed links; true: colored links
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linkcolor=blue, % color of internal links
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citecolor=green, % color of links to bibliography
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filecolor=magenta, % color of file links
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urlcolor=cyan % color of external links
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}
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\ifthenelse{\boolean{PrintVersion}}{ % for improved print quality, change some hyperref options
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\hypersetup{ % override some previously defined hyperref options
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% colorlinks,%
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citecolor=black,%
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filecolor=black,%
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linkcolor=black,%
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urlcolor=black}
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}{} % end of ifthenelse (no else)
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\usepackage{cite}
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\usepackage[acronyms]{glossaries} % Exception to the rule of hyperref being the last add-on package
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% If glossaries-extra is not in your LaTeX distribution, get it from CTAN (http://ctan.org/pkg/glossaries-extra),
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% although it's supposed to be in both the TeX Live and MikTeX distributions. There are also documentation and
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% installation instructions there.
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\input{glossaries}
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% Setting up the page margins...
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% uWaterloo thesis requirements specify a minimum of 1 inch (72pt) margin at the
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% top, bottom, and outside page edges and a 1.125 in. (81pt) gutter margin (on binding side).
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% While this is not an issue for electronic viewing, a PDF may be printed, and so we have the same page layout for both printed and electronic versions, we leave the gutter margin in.
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% Set margins to minimum permitted by uWaterloo thesis regulations:
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\setlength{\marginparwidth}{0pt} % width of margin notes
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% N.B. If margin\newcommand\comment[1]{\textbf{#1}}\input{myfile} notes are used, you must adjust \textwidth, \marginparwidth
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% and \marginparsep so that the space left between the margin notes and page
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% edge is less than 15 mm (0.6 in.)
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\setlength{\marginparsep}{0pt} % width of space between body text and margin notes
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\setlength{\evensidemargin}{0.125in} % Adds 1/8 in. to binding side of all
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% even-numbered pages when the "twoside" printing option is selected
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\setlength{\oddsidemargin}{0.125in} % Adds 1/8 in. to the left of all pages when "oneside" printing is selected, and to the left of all odd-numbered pages when "twoside" printing is selected
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\setlength{\textwidth}{6.375in} % assuming US letter paper (8.5 in. x 11 in.) and side margins as above
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\raggedbottom
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% The following statement specifies the amount of space between paragraphs. Other reasonable specifications are \bigskipamount and \smallskipamount.
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\setlength{\parskip}{\medskipamount}
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% The following statement controls the line spacing.
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% The default spacing corresponds to good typographic conventions and only slight changes (e.g., perhaps "1.2"), if any, should be made.
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\renewcommand{\baselinestretch}{1} % this is the default line space setting
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% By default, each chapter will start on a recto (right-hand side) page.
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% We also force each section of the front pages to start on a recto page by inserting \cleardoublepage commands.
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% In many cases, this will require that the verso (left-hand) page be blank, and while it should be counted, a page number should not be printed.
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% The following statements ensure a page number is not printed on an otherwise blank verso page.
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\let\origdoublepage\cleardoublepage
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\newcommand{\clearemptydoublepage}{%
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\clearpage{\pagestyle{empty}\origdoublepage}}
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\let\cleardoublepage\clearemptydoublepage
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% Define Glossary terms (This is properly done here, in the preamble and could also be \input{} from a separate file...)
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% Custom command to print visual indications of comments
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\newcommand\agd[1]{{\color{red}$\bigstar$}\footnote{agd: #1}}
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\newcommand{\cn}{{\color{purple}[citation needed]}}
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%======================================================================
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% L O G I C A L D O C U M E N T
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% The logical document contains the main content of your thesis.
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% Being a large document, it is a good idea to divide your thesis into several files, each one containing one chapter or other significant chunk of content, so you can easily shuffle things around later if desired.
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%======================================================================
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\begin{document}
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%----------------------------------------------------------------------
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% FRONT MATERIAL
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% title page,declaration, borrowers' page, abstract, acknowledgements,
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% dedication, table of contents, list of tables, list of figures, nomenclature, etc.
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%----------------------------------------------------------------------
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\input{frontpages}
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%----------------------------------------------------------------------
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% MAIN BODY
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% We suggest using a separate file for each chapter of your thesis.
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% Start each chapter file with the \chapter command.
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% Only use \documentclass or \begin{document} and \end{document} commands in this master document.
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% Tip: Putting each sentence on a new line is a way to simplify later editing.
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%----------------------------------------------------------------------
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\input{introduction}
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\input{pastwork}
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\input{futurwork}
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\input{timetable}
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\input{conclusion}
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%----------------------------------------------------------------------
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% END MATERIAL
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% Bibliography, Appendices, Index, etc.
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%----------------------------------------------------------------------
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% Bibliography
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% The following statement selects the style to use for references.
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% It controls the sort order of the entries in the bibliography and also the formatting for the in-text labels.
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\bibliographystyle{plain}
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% This specifies the location of the file containing the bibliographic information.
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% It assumes you're using BibTeX to manage your references (if not, why not?).
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\cleardoublepage % This is needed if the "book" document class is used, to place the anchor in the correct page, because the bibliography will start on its own page.
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% Use \clearpage instead if the document class uses the "oneside" argument
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\phantomsection % With hyperref package, enables hyperlinking from the table of contents to bibliography
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% The following statement causes the title "References" to be used for the bibliography section:
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\renewcommand*{\bibname}{References}
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% Add the References to the Table of Contents
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\addcontentsline{toc}{chapter}{\textbf{References}}
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\bibliography{bibliography.bib}
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% Tip: You can create multiple .bib files to organize your references.
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% Just list them all in the \bibliogaphy command, separated by commas (no spaces).
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% The following statement causes the specified references to be added to the bibliography even if they were not cited in the text.
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% The asterisk is a wildcard that causes all entries in the bibliographic database to be included (optional).
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%\nocite{*}
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%----------------------------------------------------------------------
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% Appendices
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% The \appendix statement indicates the beginning of the appendices.
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\appendix
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% Add an un-numbered title page before the appendices and a line in the Table of Contents
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\chapter*{APPENDICES}
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\addcontentsline{toc}{chapter}{APPENDICES}
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% Appendices are just more chapters, with different labeling (letters instead of numbers).
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% GLOSSARIES (Lists of definitions, abbreviations, symbols, etc. provided by the glossaries-extra package)
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% -----------------------------
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%\printglossaries
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%\cleardoublepage
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%\phantomsection % allows hyperref to link to the correct page
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%----------------------------------------------------------------------
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\end{document} % end of logical document
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